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» Determining gene expression on a single pair of microarrays
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BMCBI
2007
227views more  BMCBI 2007»
13 years 7 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
CBMS
2007
IEEE
14 years 1 months ago
An Unsupervised and Fully-Automated Image Analysis Method for cDNA Microarrays
Microarray gene expression image analysis is a labor-intensive task and requires human intervention since microarray images are contaminated with noise and artifacts while spots a...
Eleni Zacharia, Dimitrios E. Maroulis
BMCBI
2011
12 years 11 months ago
Evaluating methods for ranking differentially expressed genes applied to MicroArray Quality Control data
Background: Statistical methods for ranking differentially expressed genes (DEGs) from gene expression data should be evaluated with regard to high sensitivity, specificity, and r...
Koji Kadota, Kentaro Shimizu
JCB
2000
103views more  JCB 2000»
13 years 7 months ago
Testing for Differentially-Expressed Genes by Maximum-Likelihood Analysis of Microarray Data
Although two-color uorescent DNA microarrays are now standard equipment in many molecular biology laboratories, methods for identifying differentially expressed genes in microarra...
Trey Ideker, Vesteinn Thorsson, Andrew F. Siegel, ...
BIBE
2007
IEEE
191views Bioinformatics» more  BIBE 2007»
14 years 1 months ago
PANP - a New Method of Gene Detection on Oligonucleotide Expression Arrays
Abstract. Currently, the method most used for gene detection calls on Affymetrix oligonucleotide arrays is provided as part of the MAS5.0 software. The MAS method uses Wilcoxon sta...
Peter Warren, Deanne Taylor, Paolo G. V. Martini, ...