The purpose of this paper is to present some numerical tools which facilitate the interpretation of simulation or data fitting results and which allow to compute optimal experimen...
Cell-DEVS enables efficient execution of complex cellular models. The goal of Cell-DEVS is to build discrete-event cell spaces, improving their definition by making the timing spe...
Background: Computational biology is often associated with genetic or genomic studies only. However, thanks to the increase of computational resources, computational models are ap...
Modeling molecular interactions in biological networks is important from various perspectives such as predicting side effects of drugs, explaining unusual cellular behavior and dr...
ABSTRACT. We present the MOlecular NETwork (MONET) ontology as a model to integrate data from different networks that govern cell function. To achieve this, different existing onto...