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BMCBI
2010
152views more  BMCBI 2010»
13 years 10 months ago
A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry
Background: High-resolution tandem mass spectra can now be readily acquired with hybrid instruments, such as LTQ-Orbitrap and LTQ-FT, in high-throughput shotgun proteomics workflo...
Chongle Pan, Byung-Hoon Park, William H. McDonald,...
BMCBI
2007
166views more  BMCBI 2007»
13 years 10 months ago
Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
BMCBI
2008
148views more  BMCBI 2008»
13 years 10 months ago
Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
Background: Liquid chromatography coupled to mass spectrometry (LC-MS) has become a prominent tool for the analysis of complex proteomics and metabolomics samples. In many applica...
Eva Lange, Ralf Tautenhahn, Steffen Neumann, Cleme...
ECCV
2006
Springer
14 years 11 months ago
Database-Guided Simultaneous Multi-slice 3D Segmentation for Volumetric Data
Abstract. Automatic delineation of anatomical structures in 3-D volumetric data is a challenging task due to the complexity of the object appearance as well as the quantity of info...
Wei Hong, Bogdan Georgescu, Xiang Sean Zhou, Srira...
ICFP
2007
ACM
14 years 9 months ago
McErlang: a model checker for a distributed functional programming language
We present a model checker for verifying distributed programs written in the Erlang programming language. Providing a model checker for Erlang is especially rewarding since the la...
Hans Svensson, Lars-Åke Fredlund