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BMCBI
2008
103views more  BMCBI 2008»
13 years 7 months ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
ISSRE
2006
IEEE
14 years 1 months ago
Metamodel-based Test Generation for Model Transformations: an Algorithm and a Tool
In a Model-Driven Development context (MDE), model transformations allow memorizing and reusing design know-how, and thus automate parts of the design and refinement steps of a so...
Erwan Brottier, Franck Fleurey, Jim Steel, Benoit ...
AIRS
2006
Springer
13 years 11 months ago
Natural Document Clustering by Clique Percolation in Random Graphs
Document clustering techniques mostly depend on models that impose explicit and/or implicit priori assumptions as to the number, size, disjunction characteristics of clusters, and/...
Wei Gao, Kam-Fai Wong
BMCBI
2010
172views more  BMCBI 2010»
13 years 7 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
ICNC
2005
Springer
14 years 1 months ago
A Game-Theoretic Approach to Competitive Learning in Self-Organizing Maps
Abstract. Self-Organizing Maps (SOM) is a powerful tool for clustering and discovering patterns in data. Competitive learning in the SOM training process focusses on finding a neu...
Joseph P. Herbert, Jingtao Yao