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ISBRA
2009
Springer
14 years 3 months ago
Analysis of Cis-Regulatory Motifs in Cassette Exons by Incorporating Exon Skipping Rates
Identification of cis-regulatory motifs has long been a hotspot in the study of alternative splicing. We propose a two-step approach: we first identify k-mer seed motifs by testing...
Sihui Zhao, Jihye Kim, Steffen Heber
SIGMOD
1999
ACM
112views Database» more  SIGMOD 1999»
14 years 27 days ago
A New Method for Similarity Indexing of Market Basket Data
In recent years, many data mining methods have been proposed for finding useful and structured information from market basket data. The association rule model was recently propos...
Charu C. Aggarwal, Joel L. Wolf, Philip S. Yu
BMCBI
2010
121views more  BMCBI 2010»
13 years 8 months ago
MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
Eduardo Corel, Florian Pitschi, Ivan Laprevotte, G...
RIAO
2007
13 years 10 months ago
Optimizations of Local Edition for Evaluating Similarity Between Monophonic Musical Sequences
Abstract: Melody is an important property for the perceptual description of Western musical pieces. In the monophonic context, retrieval systems based on melodic similarity general...
Pierre Hanna, Pascal Ferraro
BMCBI
2007
109views more  BMCBI 2007»
13 years 8 months ago
Discarding duplicate ditags in LongSAGE analysis may introduce significant error
Background: During gene expression analysis by Serial Analysis of Gene Expression (SAGE), duplicate ditags are routinely removed from the data analysis, because they are suspected...
Jeppe Emmersen, Anna M. Heidenblut, Annabeth Laurs...