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ICPR
2002
IEEE
14 years 10 months ago
A Theory of the Quasi-Static World
We present the theory behind a novel unsupervised method for discovering quasi-static objects, objects that are stationary during some interval of observation, within image sequen...
Brandon C. S. Sanders, Randal C. Nelson, Rahul Suk...
RECOMB
2006
Springer
14 years 9 months ago
Integrated Protein Interaction Networks for 11 Microbes
We have combined four different types of functional genomic data to create high coverage protein interaction networks for 11 microbes. Our integration algorithm naturally handles s...
Balaji S. Srinivasan, Antal F. Novak, Jason Flanni...
GECCO
2005
Springer
204views Optimization» more  GECCO 2005»
14 years 2 months ago
Modeling systems with internal state using evolino
Existing Recurrent Neural Networks (RNNs) are limited in their ability to model dynamical systems with nonlinearities and hidden internal states. Here we use our general framework...
Daan Wierstra, Faustino J. Gomez, Jürgen Schm...
JCB
2008
159views more  JCB 2008»
13 years 8 months ago
BayesMD: Flexible Biological Modeling for Motif Discovery
We present BayesMD, a Bayesian Motif Discovery model with several new features. Three different types of biological a priori knowledge are built into the framework in a modular fa...
Man-Hung Eric Tang, Anders Krogh, Ole Winther
CSB
2004
IEEE
208views Bioinformatics» more  CSB 2004»
14 years 18 days ago
Pair Stochastic Tree Adjoining Grammars for Aligning and Predicting Pseudoknot RNA Structures
Motivation: Since the whole genome sequences for many species are currently available, computational predictions of RNA secondary structures and computational identifications of t...
Hiroshi Matsui, Kengo Sato, Yasubumi Sakakibara