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BIBE
2007
IEEE
150views Bioinformatics» more  BIBE 2007»
14 years 3 months ago
Differential Scoring for Systolic Sequence Alignment
Systolic implementations of dynamic programming solutions that utilize a similarity matrix can achieve appreciable performance with both course- and fine-grain parallelization. A ...
Antonio E. de la Serna
BMCBI
2008
117views more  BMCBI 2008»
13 years 8 months ago
A probabilistic framework to predict protein function from interaction data integrated with semantic knowledge
Background: The functional characterization of newly discovered proteins has been a challenge in the post-genomic era. Protein-protein interactions provide insights into the funct...
Young-Rae Cho, Lei Shi, Murali Ramanathan, Aidong ...
BMCBI
2007
117views more  BMCBI 2007»
13 years 8 months ago
DNA-based watermarks using the DNA-Crypt algorithm
Background: The aim of this paper is to demonstrate the application of watermarks based on DNA sequences to identify the unauthorized use of genetically modified organisms (GMOs) ...
Dominik Heider, Angelika Barnekow
ICMCS
2009
IEEE
250views Multimedia» more  ICMCS 2009»
13 years 6 months ago
Efficient sparse self-similarity matrix construction for repeating sequence detection
This paper presents an efficient way to construct the self-similarity matrix, a popular approach, to detect repeating segments in music. Our proposed method extends the sparse suf...
Lei Wang, Chng Eng Siong, Haizhou Li
IJAR
2011
118views more  IJAR 2011»
13 years 4 days ago
A sequential pattern mining algorithm using rough set theory
Sequential pattern mining is a crucial but challenging task in many applications, e.g., analyzing the behaviors of data in transactions and discovering frequent patterns in time se...
Ken Kaneiwa, Yasuo Kudo