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BMCBI
2007
166views more  BMCBI 2007»
13 years 9 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
BMCBI
2007
198views more  BMCBI 2007»
13 years 9 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
PR
2006
78views more  PR 2006»
13 years 9 months ago
Similarity-based analysis for large networks of ultra-low resolution sensors
By analyzing the similarities between bit streams coming from a network of motion detectors, we can recover the network geometry and discover structure in the human behavior being...
Christopher Richard Wren, David C. Minnen, Sriniva...
TPDS
2008
105views more  TPDS 2008»
13 years 9 months ago
Analysis of TTL-Based Consistency in Unstructured Peer-to-Peer Networks
Consistency maintenance is important to the sharing of dynamic contents in peer-to-peer (P2P) networks. The TTL-based mechanism is a natural choice for maintaining freshness in P2P...
Xueyan Tang, Jianliang Xu, Wang-Chien Lee
BMCBI
2004
154views more  BMCBI 2004»
13 years 9 months ago
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
Background: With ever increasing numbers of closely related virus genomes being sequenced, it has become desirable to be able to compare two genomes at a level more detailed than ...
Ryan Brodie, Alex J. Smith, Rachel L. Roper, Vasil...