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BMCBI
2007
106views more  BMCBI 2007»
13 years 10 months ago
Simultaneous identification of long similar substrings in large sets of sequences
Background: Sequence comparison faces new challenges today, with many complete genomes and large libraries of transcripts known. Gene annotation pipelines match these sequences in...
Jürgen Kleffe, Friedrich Möller, Burghar...
COMPSAC
2003
IEEE
14 years 3 months ago
An Object-Passing Model for Parallel Programming
This paper introduces an object-passing model for parallel and distributed application development. Object passing provides the object-oriented application developer with powerful...
Jameela Al-Jaroodi, Nader Mohamed
EDBT
2011
ACM
256views Database» more  EDBT 2011»
13 years 1 months ago
RanKloud: a scalable ranked query processing framework on hadoop
The popularity of batch-oriented cluster architectures like Hadoop is on the rise. These batch-based systems successfully achieve high degrees of scalability by carefully allocati...
K. Selçuk Candan, Parth Nagarkar, Mithila N...
BMCBI
2006
131views more  BMCBI 2006»
13 years 10 months ago
Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations
Background: Microarrays measure the binding of nucleotide sequences to a set of sequence specific probes. This information is combined with annotation specifying the relationship ...
Michal J. Okoniewski, Crispin J. Miller
ICML
2007
IEEE
14 years 11 months ago
Learning distance function by coding similarity
We consider the problem of learning a similarity function from a set of positive equivalence constraints, i.e. 'similar' point pairs. We define the similarity in informa...
Aharon Bar-Hillel, Daphna Weinshall