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BMCBI
2008
130views more  BMCBI 2008»
13 years 11 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
BMCBI
2008
131views more  BMCBI 2008»
13 years 11 months ago
Major copy proportion analysis of tumor samples using SNP arrays
Background: Single nucleotide polymorphisms (SNPs) are the most common genetic variations in the human genome and are useful as genomic markers. Oligonucleotide SNP microarrays ha...
Cheng Li, Rameen Beroukhim, Barbara A. Weir, Wendy...
BMCBI
2008
111views more  BMCBI 2008»
13 years 11 months ago
VisualRepbase: an interface for the study of occurrences of transposable element families
Background: Repbase is a reference database of eukaryotic repetitive DNA, which includes prototypic sequences of repeats and basic information described in annotations. Repbase al...
Sébastien Tempel, Matthew Jurka, Jerzy Jurk...
BMCBI
2007
82views more  BMCBI 2007»
13 years 11 months ago
Visualization of three-way comparisons of omics data
Background: Density plot visualizations (also referred to as heat maps or color maps) are widely used in different fields including large-scale omics studies in biological science...
Richard Baran, Martin Robert, Makoto Suematsu, Tom...
CN
2010
183views more  CN 2010»
13 years 11 months ago
A learning automata based scheduling solution to the dynamic point coverage problem in wireless sensor networks
The dynamic point coverage problem in wireless sensor networks is to detect some moving target points in the area of the network using as little sensor nodes as possible. One way ...
Mehdi Esnaashari, Mohammad Reza Meybodi