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» Documenting Pattern Use in Java Programs
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BMCBI
2006
180views more  BMCBI 2006»
13 years 8 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
ICPPW
2008
IEEE
14 years 2 months ago
Non-Contiguous I/O Support for Object-Based Storage
The access patterns performed by disk-intensive applications vary widely, from simple contiguous reads or writes through an entire file to completely unpredictable random access....
Dennis Dalessandro, Ananth Devulapalli, Pete Wycko...
BMCBI
2007
156views more  BMCBI 2007»
13 years 8 months ago
Bio: : NEXUS: a Perl API for the NEXUS format for comparative biological data
Background: Evolutionary analysis provides a formal framework for comparative analysis of genomic and other data. In evolutionary analysis, observed data are treated as the termin...
Thomas Hladish, Vivek Gopalan, Chengzhi Liang, Wei...
SIGSOFT
2008
ACM
14 years 8 months ago
The implications of method placement on API learnability
To better understand what makes Application Programming Interfaces (APIs) hard to use and how to improve them, recent research has begun studying programmers' strategies and ...
Jeffrey Stylos, Brad A. Myers
PLANX
2007
13 years 9 months ago
XML Transformation Language Based on Monadic Second Order Logic
Although monadic second-order logic (MSO) has been a foundation of XML queries, little work has attempted to take MSO formulae themselves as a programming construct. Indeed, MSO f...
Kazuhiro Inaba, Haruo Hosoya