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» Dominant Sets and Hierarchical Clustering
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WABI
2009
Springer
102views Bioinformatics» more  WABI 2009»
14 years 2 months ago
A Tree Based Method for the Rapid Screening of Chemical Fingerprints
Background: The fingerprint of a molecule is a bitstring based on its structure, constructed such that structurally similar molecules will have similar fingerprints. Molecular fin...
Thomas G. Kristensen, Jesper Nielsen, Christian N....
BMCBI
2010
118views more  BMCBI 2010»
13 years 7 months ago
From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification
Background: Machine learning techniques have shown to improve bacterial species classification based on fatty acid methyl ester (FAME) data. Nonetheless, FAME analysis has a limit...
Bram Slabbinck, Willem Waegeman, Peter Dawyndt, Pa...
BMCBI
2010
202views more  BMCBI 2010»
13 years 7 months ago
NeMo: Network Module identification in Cytoscape
Background: As the size of the known human interactome grows, biologists increasingly rely on computational tools to identify patterns that represent protein complexes and pathway...
Corban G. Rivera, Rachit Vakil, Joel S. Bader
DEXA
2011
Springer
296views Database» more  DEXA 2011»
12 years 7 months ago
A Scalable Tag-Based Recommender System for New Users of the Social Web
Abstract. Folksonomies have become a powerful tool to describe, discover, search, and navigate online resources (e.g., pictures, videos, blogs) on the Social Web. Unlike taxonomies...
Valentina Zanardi, Licia Capra
KDD
2009
ACM
188views Data Mining» more  KDD 2009»
14 years 8 months ago
Mining discrete patterns via binary matrix factorization
Mining discrete patterns in binary data is important for subsampling, compression, and clustering. We consider rankone binary matrix approximations that identify the dominant patt...
Bao-Hong Shen, Shuiwang Ji, Jieping Ye