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» Driver Measurement: Methods and Applications
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BMCBI
2005
178views more  BMCBI 2005»
13 years 9 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
BMCBI
2010
72views more  BMCBI 2010»
13 years 9 months ago
Phylogenetic representativeness: a new method for evaluating taxon sampling in evolutionary studies
Background: Taxon sampling is a major concern in phylogenetic studies. Incomplete, biased, or improper taxon sampling can lead to misleading results in reconstructing evolutionary...
Federico Plazzi, Ronald R. Ferrucci, Marco Passamo...
BMCBI
2006
116views more  BMCBI 2006»
13 years 9 months ago
ROKU: a novel method for identification of tissue-specific genes
Background: One of the important goals of microarray research is the identification of genes whose expression is considerably higher or lower in some tissues than in others. We wo...
Koji Kadota, Jiazhen Ye, Yuji Nakai, Tohru Terada,...
RECOMB
2007
Springer
14 years 9 months ago
Production-Passage-Time Approximation: A New Approximation Method to Accelerate the Simulation Process of Enzymatic Reactions
Abstract. Given the substantial computational requirements of stochastic simulation, approximation is essential for efficient analysis of any realistic biochemical system. This pap...
Hiroyuki Kuwahara, Chris J. Myers
ICDM
2008
IEEE
186views Data Mining» more  ICDM 2008»
14 years 3 months ago
xCrawl: A High-Recall Crawling Method for Web Mining
Web Mining Systems exploit the redundancy of data published on the Web to automatically extract information from existing web documents. The first step in the Information Extract...
Kostyantyn M. Shchekotykhin, Dietmar Jannach, Gerh...