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PPOPP
2012
ACM
13 years 9 months ago
DOJ: dynamically parallelizing object-oriented programs
We present Dynamic Out-of-Order Java (DOJ), a dynamic parallelization approach. In DOJ, a developer annotates code blocks as tasks to decouple these blocks from the parent executi...
Yong Hun Eom, Stephen Yang, James Christopher Jeni...
MP
2006
110views more  MP 2006»
15 years 2 months ago
Decomposition and Dynamic Cut Generation in Integer Linear Programming
Decomposition algorithms such as Lagrangian relaxation and Dantzig-Wolfe decomposition are well-known methods that can be used to generate bounds for mixed-integer linear programmi...
Ted K. Ralphs, Matthew V. Galati
WSC
1998
15 years 3 months ago
Parallel Implementation of a Molecular Dynamics Simulation Program
We have taken a NIST molecular dynamics simulation program (md3), which was configured as a single sequential process running on a CRAY C90 vector supercomputer, and parallelized ...
Alan Mink, Christophe Bailly
GECCO
2006
Springer
185views Optimization» more  GECCO 2006»
15 years 5 months ago
Convergence to global optima for genetic programming systems with dynamically scaled operators
This work shows asymptotic convergence to global optima for a family of dynamically scaled genetic programming systems where the underlying population consists of a fixed number o...
Lothar M. Schmitt, Stefan Droste
BMCBI
2002
108views more  BMCBI 2002»
15 years 1 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy