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BMCBI
2008
130views more  BMCBI 2008»
13 years 7 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
ACL
2010
13 years 5 months ago
A Tree Transducer Model for Synchronous Tree-Adjoining Grammars
A characterization of the expressive power of synchronous tree-adjoining grammars (STAGs) in terms of tree transducers (or equivalently, synchronous tree substitution grammars) is...
Andreas Maletti
WWW
2006
ACM
14 years 8 months ago
Generating query substitutions
We introduce the notion of query substitution, that is, generating a new query to replace a user's original search query. Our technique uses modifications based on typical su...
Rosie Jones, Benjamin Rey, Omid Madani, Wiley Grei...
CMSB
2008
Springer
13 years 9 months ago
Stochastic Analysis of Amino Acid Substitution in Protein Synthesis
Abstract. We present a formal analysis of amino acid replacement during mRNA translation. Building on an abstract stochastic model of arrival of tRNAs and their processing at the r...
Dragan Bosnacki, Huub M. M. ten Eikelder, M. N. St...
FGCS
2007
112views more  FGCS 2007»
13 years 7 months ago
A commodity market algorithm for pricing substitutable Grid resources
A crucial goal for future Grid systems is to strive towards user-centric service provisioning. A way to achieve this is through the use of economics-based resource management. Cur...
Gunther Stuer, Kurt Vanmechelen, Jan Broeckhove