Detecting and predicting a program’s execution phases are crucial to dynamic optimizations and dynamically adaptable systems. This paper shows that a phase can be associated with...
Jinpyo Kim, Sreekumar V. Kodakara, Wei-Chung Hsu, ...
Prediction and alignment of RNA pseudoknot structures are NP-hard. Nevertheless, several efficient prediction algorithms by dynamic programming have been proposed for restricted cl...
We introduce a new scoring method for calculation of alignments of optical maps. Missing cuts, false cuts, and sizing errors present in optical maps are addressed by our alignment...
Anton Valouev, Lei Li, Yu-Chi Liu, David C. Schwar...
Aligning DNA and protein sequences is a core technique in molecular biology. Often, it is desirable to include partial prior knowledge and conditions in an alignment. Going beyond...
This paper presents a Bayesian method for temporally aligning a music score and an audio rendition. A critical problem in audio-toscore alignment is in dealing with the wide varie...
Akira Maezawa, Hiroshi G. Okuno, Tetsuya Ogata, Ma...