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» Dynamic programming alignment accuracy
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CGO
2004
IEEE
13 years 11 months ago
The Accuracy of Initial Prediction in Two-Phase Dynamic Binary Translators
Dynamic binary translators use a two-phase approach to identify and optimize frequently executed code dynamically. In the first step (profiling phase), blocks of code are interpre...
Youfeng Wu, Mauricio Breternitz Jr., Justin Quek, ...
BMCBI
2007
119views more  BMCBI 2007»
13 years 7 months ago
A dynamic programming approach for the alignment of signal peaks in multiple gas chromatography-mass spectrometry experiments
Background: Gas chromatography-mass spectrometry (GC-MS) is a robust platform for the profiling of certain classes of small molecules in biological samples. When multiple samples ...
Mark D. Robinson, David P. De Souza, Woon Wai Keen...
LCPC
2009
Springer
14 years 5 days ago
Enforcing Textual Alignment of Collectives Using Dynamic Checks
Abstract. Many parallel programs are written in a single-program, multipledata (SPMD) style, in which synchronization is provided using collective operations that all threads execu...
Amir Kamil, Katherine A. Yelick
IJCAI
2003
13 years 9 months ago
Comparing Best-First Search and Dynamic Programming for Optimal Multiple Sequence Alignment
Sequence alignment is an important problem in computational biology. We compare two different approaches to the problem of optimally aligning two or more character strings: bounde...
Heath Hohwald, Ignacio Thayer, Richard E. Korf
JCB
2000
105views more  JCB 2000»
13 years 7 months ago
A Greedy Algorithm for Aligning DNA Sequences
For aligning DNA sequences that differ only by sequencing errors, or by equivalent errors from other sources, a greedy algorithm can be much faster than traditional dynamic progra...
Zheng Zhang 0004, Scott Schwartz, Lukas Wagner, We...