In this work we develop a new technique for over-approximating (in the sense of timed trace inclusion) continuous dynamical systems by timed auThis technique refines commonly-used ...
Background: Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs si...
Amrita Pati, Cecilia Vasquez-Robinet, Lenwood S. H...
Informational Macrodynamics (IMD) presents a unified informational systemic approach with common information language for modeling, analysis and optimization of a variety of inter...
A stochastic numerical scheme for an extended immersed boundary method which incorporates thermal fluctuations for the simulation of microscopic biological systems consisting of fl...
Gene regulatory networks (GRNs) are complex control systems that govern the interaction of genes, which ultimately control cellular processes at the protein level. GRNs can be ted...