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    » E-CAST: A Data Mining Algorithm for Gene Expression Data
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    BMCBI
    2007
    227views more  BMCBI 2007»
    Growing functional modules from a seed protein via integration of protein interaction and gene expression data
    13 years 9 months ago
    Growing functional modules from a seed protein via integration of protein interaction and gene expression data
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    Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
    Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
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    BMCBI
    2007
    127views more  BMCBI 2007»
    A Latent Variable Approach for Meta-Analysis of Gene Expression Data from Multiple Microarray Experiments
    13 years 9 months ago
    A Latent Variable Approach for Meta-Analysis of Gene Expression Data from Multiple Microarray Experiments
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    Background: With the explosion in data generated using microarray technology by different investigators working on similar experiments, it is of interest to combine results across...
    Hyungwon Choi, Ronglai Shen, Arul M. Chinnaiyan, D...
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    IJCSA
    2007
    98views more  IJCSA 2007»
    Extracted Knowledge Interpretation in mining biological data: a survey
    13 years 9 months ago
    Extracted Knowledge Interpretation in mining biological data: a survey
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    This paper discusses different approaches for integrating biological knowledge in gene expression analysis. Indeed we are interested in the fifth step of microarray analysis pro...
    Martine Collard, Ricardo Martínez
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    BMCBI
    2007
    146views more  BMCBI 2007»
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    13 years 9 months ago
    Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
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    Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
    Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
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    BMCBI
    2007
    140views more  BMCBI 2007»
    Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets
    13 years 9 months ago
    Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets
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    Background: Independently derived expression profiles of the same biological condition often have few genes in common. In this study, we created populations of expression profiles...
    Michael Gormley, William Dampier, Adam Ertel, Bilg...
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