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» EDGE: extraction and analysis of differential gene expressio...
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BMCBI
2007
103views more  BMCBI 2007»
13 years 9 months ago
Cross platform microarray analysis for robust identification of differentially expressed genes
Roberta Bosotti, Giuseppe Locatelli, Sandra Healy,...
BMCBI
2008
97views more  BMCBI 2008»
13 years 9 months ago
MCM-test: a fuzzy-set-theory-based approach to differential analysis of gene pathways
Background: Gene pathway can be defined as a group of genes that interact with each other to perform some biological processes. Along with the efforts to identify the individual g...
Lily R. Liang, Vinay Mandal, Yi Lu, Deepak Kumar
BMCBI
2010
92views more  BMCBI 2010»
13 years 9 months ago
Integrating gene expression and GO classification for PCA by preclustering
Background: Gene expression data can be analyzed by summarizing groups of individual gene expression profiles based on GO annotation information. The mean expression profile per g...
Jorn R. de Haan, Ester Piek, René C. van Sc...
BMCBI
2010
97views more  BMCBI 2010»
13 years 4 months ago
A semi-parametric Bayesian model for unsupervised differential co-expression analysis
Background: Differential co-expression analysis is an emerging strategy for characterizing disease related dysregulation of gene expression regulatory networks. Given pre-defined ...
Johannes M. Freudenberg, Siva Sivaganesan, Michael...
BMCBI
2007
135views more  BMCBI 2007»
13 years 9 months ago
Detecting multivariate differentially expressed genes
Background: Gene expression is governed by complex networks, and differences in expression patterns between distinct biological conditions may therefore be complex and multivariat...
Roland Nilsson, José M. Peña, Johan ...