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ISMB
1994
13 years 10 months ago
Kinematic Manipulation of Molecular Chains Subject to Rigid Constraint
Wepresent algorithms for kinematic manipulation of molecular chains subject to fixed bond lengths and bond angles. They are useful for calculating conformations of a molecule subj...
Dinesh Manocha, Yunshan Zhu
ICASSP
2010
IEEE
13 years 9 months ago
Buffer management for multi-application image processing on multi-core platforms: Analysis and case study
Due to the limited amounts of on-chip memory, large volumes of data, and performance and power consumption overhead associated with interprocessor communication, efficient managem...
Dong-Ik Ko, Nara Won, Shuvra S. Bhattacharyya
CORR
2010
Springer
167views Education» more  CORR 2010»
13 years 9 months ago
Network Flow Algorithms for Structured Sparsity
We consider a class of learning problems that involve a structured sparsityinducing norm defined as the sum of -norms over groups of variables. Whereas a lot of effort has been pu...
Julien Mairal, Rodolphe Jenatton, Guillaume Obozin...
RECOMB
2002
Springer
14 years 9 months ago
DNA sequence evolution with neighbor-dependent mutation
We introduce a model of DNA sequence evolution which can account for biases in mutation rates that depend on the identity of the neighboring bases. An analytic solution for this c...
Peter F. Arndt, Christopher B. Burge, Terence Hwa
BMCBI
2010
88views more  BMCBI 2010»
13 years 9 months ago
Robust probabilistic superposition and comparison of protein structures
Background: Protein structure comparison is a central issue in structural bioinformatics. The standard dissimilarity measure for protein structures is the root mean square deviati...
Martin Mechelke, Michael Habeck