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    BMCBI
    2010
    109views more  BMCBI 2010»
    Pripper: prediction of caspase cleavage sites from whole proteomes
    13 years 7 months ago
    Pripper: prediction of caspase cleavage sites from whole proteomes
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    Background: Caspases are a family of proteases that have central functions in programmed cell death (apoptosis) and inflammation. Caspases mediate their effects through aspartate-...
    Mirva Piippo, Niina Lietzén, Olli Nevalaine...
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    BMCBI
    2005
    90views more  BMCBI 2005»
    TMB-Hunt: An amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins
    13 years 7 months ago
    TMB-Hunt: An amino acid composition based method to screen proteomes for beta-barrel transmembrane proteins
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    Background: Beta-barrel transmembrane (bbtm) proteins are a functionally important and diverse group of proteins expressed in the outer membranes of bacteria (both gram negative a...
    Andrew G. Garrow, Alison Agnew, David R. Westhead
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    BMCBI
    2011
    179views Artificial Intelligence» more  BMCBI 2011»
    In-silico prediction of disorder content using hybrid sequence representation
    12 years 11 months ago
    In-silico prediction of disorder content using hybrid sequence representation
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    Background: Intrinsically disordered proteins play important roles in various cellular activities and their prevalence was implicated in a number of human diseases. The knowledge ...
    Marcin J. Mizianty, Tuo Zhang, Bin Xue, Yaoqi Zhou...
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    BIOINFORMATICS
    2011
    355views Artificial Intelligence» more  BIOINFORMATICS 2011»
    ProDy: Protein Dynamics Inferred from Theory and Experiments
    12 years 11 months ago
    ProDy: Protein Dynamics Inferred from Theory and Experiments
    Download  www.ccbb.pitt.edu
    Summary: We developed a Python package, ProDy, for structurebased analysis of protein dynamics. ProDy allows for quantitative characterization of structural variations in heteroge...
    Ahmet Bakan, Lidio M. Meireles, Ivet Bahar
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    BMCBI
    2010
    97views more  BMCBI 2010»
    Kinome-wide interaction modelling using alignment-based and alignment-independent approaches for kinase description and linear a
    13 years 7 months ago
    Kinome-wide interaction modelling using alignment-based and alignment-independent approaches for kinase description and linear a
    Download  www.biomedcentral.com
    Background: Protein kinases play crucial roles in cell growth, differentiation, and apoptosis. Abnormal function of protein kinases can lead to many serious diseases, such as canc...
    Maris Lapinsh, Jarl E. S. Wikberg
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