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» Efficient Creation of Statistics over Query Expressions
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BMCBI
2005
159views more  BMCBI 2005»
13 years 7 months ago
Columba: an integrated database of proteins, structures, and annotations
Background: Structural and functional research often requires the computation of sets of protein structures based on certain properties of the proteins, such as sequence features,...
Silke Trißl, Kristian Rother, Heiko Mül...
SIGMOD
2004
ACM
149views Database» more  SIGMOD 2004»
14 years 7 months ago
Incremental Maintenance of XML Structural Indexes
Increasing popularity of XML in recent years has generated much interest in query processing over graph-structured data. To support efficient evaluation of path expressions, many ...
Ke Yi, Hao He, Ioana Stanoi, Jun Yang 0001
BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
Computation of significance scores of unweighted Gene Set Enrichment Analyses
Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
Andreas Keller, Christina Backes, Hans-Peter Lenho...
VLDB
2007
ACM
153views Database» more  VLDB 2007»
14 years 8 months ago
Declarative Information Extraction Using Datalog with Embedded Extraction Predicates
In this paper we argue that developing information extraction (IE) programs using Datalog with embedded procedural extraction predicates is a good way to proceed. First, compared ...
Warren Shen, AnHai Doan, Jeffrey F. Naughton, Ragh...
BMCBI
2007
128views more  BMCBI 2007»
13 years 7 months ago
A Bayesian nonparametric method for prediction in EST analysis
Background: Expressed sequence tags (ESTs) analyses are a fundamental tool for gene identification in organisms. Given a preliminary EST sample from a certain library, several sta...
Antonio Lijoi, Ramsés H. Mena, Igor Prü...