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» Efficient Seeding Techniques for Protein Similarity Search
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SIGMOD
2005
ACM
178views Database» more  SIGMOD 2005»
14 years 9 months ago
Towards Effective Indexing for Very Large Video Sequence Database
With rapid advances in video processing technologies and ever fast increments in network bandwidth, the popularity of video content publishing and sharing has made similarity sear...
Heng Tao Shen, Beng Chin Ooi, Xiaofang Zhou
BMCBI
2005
152views more  BMCBI 2005»
13 years 9 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
CHI
2007
ACM
14 years 9 months ago
Pointing and beyond: an operationalization and preliminary evaluation of multi-scale searching
A number of experimental studies based on domain-specific tasks have evaluated the efficiency of navigation techniques for searching multi-scale worlds. The discrepancies among th...
Emmanuel Pietriga, Caroline Appert, Michel Beaudou...
RECOMB
2007
Springer
14 years 9 months ago
Free Energy Estimates of All-Atom Protein Structures Using Generalized Belief Propagation
We present a technique for approximating the free energy of protein structures using Generalized Belief Propagation (GBP). The accuracy and utility of these estimates are then demo...
Hetunandan Kamisetty, Eric P. Xing, Christopher Ja...
TIP
2008
169views more  TIP 2008»
13 years 9 months ago
Efficient Nonlocal Means for Denoising of Textural Patterns
The present paper contributes two novel techniques in the context of image restoration by nonlocal filtering. Firstly, we introduce an efficient implementation of the nonlocal mean...
Thomas Brox, Oliver Kleinschmidt, Daniel Cremers