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BMCBI
2008
211views more  BMCBI 2008»
13 years 7 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
JAVA
2001
Springer
13 years 12 months ago
Supporting dynamic parallel object arrays
We present efficient support for generalized arrays of parallel data driven objects. Array elements are regular C++ objects, and are scattered across the parallel machine. An indi...
Orion Sky Lawlor, Laxmikant V. Kalé
ASPLOS
2008
ACM
13 years 9 months ago
SoftSig: software-exposed hardware signatures for code analysis and optimization
Many code analysis techniques for optimization, debugging, or parallelization need to perform runtime disambiguation of sets of addresses. Such operations can be supported efficie...
James Tuck, Wonsun Ahn, Luis Ceze, Josep Torrellas
15
Voted
REFLECTION
1999
Springer
13 years 11 months ago
Metaprogramming Domain Specific Metaprograms
When a metaprogram automatically creates rules, some created rules are useless because they can never apply. Some metarules, that we call impossibility metarules, are used to remov...
Tristan Cazenave
ICIP
2001
IEEE
14 years 9 months ago
Prescient mode selection for robust video coding
In standard predictive video coders, intra-mode coding of macroblocks (MBs) provides packet loss resilience, at the cost of reduced compression efficiency. Conventional mode selec...
Rui Zhang, Shankar L. Regunathan, Kenneth Rose