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» Efficiently Implementing Episodic Memory
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BMCBI
2010
126views more  BMCBI 2010»
13 years 8 months ago
Cgaln: fast and space-efficient whole-genome alignment
Background: Whole-genome sequence alignment is an essential process for extracting valuable information about the functions, evolution, and peculiarities of genomes under investig...
Ryuichiro Nakato, Osamu Gotoh
SIGOPS
2010
179views more  SIGOPS 2010»
13 years 3 months ago
Online cache modeling for commodity multicore processors
Modern chip-level multiprocessors (CMPs) contain multiple processor cores sharing a common last-level cache, memory interconnects, and other hardware resources. Workloads running ...
Richard West, Puneet Zaroo, Carl A. Waldspurger, X...
BMCBI
2011
13 years 5 days ago
Proteinortho: Detection of (Co-)Orthologs in Large-Scale Analysis
Background: Orthology analysis is an important part of data analysis in many areas of bioinformatics such as comparative genomics and molecular phylogenetics. The ever-increasing ...
Marcus Lechner, Sven Findeiß, Lydia Steiner,...
SIGMOD
2007
ACM
124views Database» more  SIGMOD 2007»
14 years 8 months ago
Query suspend and resume
Suppose a long-running analytical query is executing on a database server and has been allocated a large amount of physical memory. A high-priority task comes in and we need to ru...
Badrish Chandramouli, Christopher N. Bond, Shivnat...
ICDE
2010
IEEE
248views Database» more  ICDE 2010»
14 years 8 months ago
FPGA Acceleration for the Frequent Item Problem
Abstract-- Field-programmable gate arrays (FPGAs) can provide performance advantages with a lower resource consumption (e.g., energy) than conventional CPUs. In this paper, we show...
Gustavo Alonso, Jens Teubner, René Mül...