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BMCBI
2007
113views more  BMCBI 2007»
13 years 10 months ago
PILER-CR: Fast and accurate identification of CRISPR repeats
Background: Sequencing of prokaryotic genomes has recently revealed the presence of CRISPR elements: short, highly conserved repeats separated by unique sequences of similar lengt...
Robert C. Edgar
ENTCS
2007
168views more  ENTCS 2007»
13 years 10 months ago
Bytecode Rewriting in Tom
In this paper, we present a term rewriting based library for manipulating Java bytecode. We define a mapping from bytecode programs to algebraic terms, and we use Tom, an extensi...
Emilie Balland, Pierre-Etienne Moreau, Antoine Rei...
TSE
2008
107views more  TSE 2008»
13 years 9 months ago
Interface Grammars for Modular Software Model Checking
We propose an interface specification language based on grammars for modular software model checking. In our interface specification language, component interfaces are specified a...
Graham Hughes, Tevfik Bultan
CACM
1998
110views more  CACM 1998»
13 years 9 months ago
Viewing WISs as Database Applications
abstraction for modeling these problems is to view the Web as a collection of (usually small and heterogeneous) databases, and to view programs that extract and process Web data au...
Gustavo O. Arocena, Alberto O. Mendelzon
JISE
1998
84views more  JISE 1998»
13 years 9 months ago
Determining the Idle Time of a Tiling: New Results
In the framework of perfect loop nests with uniform dependences, tiling has been extensively studied as a source-to-source program transformation. We build upon recent results by ...
Frederic Desprez, Jack Dongarra, Fabrice Rastello,...