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BIBE
2007
IEEE
153views Bioinformatics» more  BIBE 2007»
15 years 6 months ago
Combined expression data with missing values and gene interaction network analysis: a Markovian integrated approach
—DNA microarray technologies provide means for monitoring in the order of tens of thousands of gene expression levels quantitatively and simultaneously. However data generated in...
Juliette Blanchet, Matthieu Vignes
BIBE
2008
IEEE
15 years 10 months ago
VIP: Visualization of integrated proteomics data
—The post-genomic era is characterized by the rapid data accumulation leading to unwieldy and large volumes of biological data. The proteomics results (large sets of identified p...
Eugenia G. Giannopoulou, Giorgos Lepouras, Elias S...
ICSE
2011
IEEE-ACM
14 years 7 months ago
The quamoco tool chain for quality modeling and assessment
Continuous quality assessment is crucial for the long-term success of evolving software. On the one hand, code analysis tools automatically supply quality indicators, but do not p...
Florian Deissenboeck, Lars Heinemann, Markus Herrm...
BMCBI
2010
143views more  BMCBI 2010»
15 years 4 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
BMCBI
2010
167views more  BMCBI 2010»
15 years 4 months ago
BisoGenet: a new tool for gene network building, visualization and analysis
Background: The increasing availability and diversity of omics data in the post-genomic era offers new perspectives in most areas of biomedical research. Graph-based biological ne...
Alexander Martin, Maria Elena Ochagavia, Laya C. R...