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WSC
1998
13 years 10 months ago
MODSIM III - a Tutorial with Advances in Database Access and HLA Support
MODSIM II is an object-oriented discrete event simulation language featuring extensive run-time libraries, graphical user interface and results presentation tools, database access...
John Goble, Brian Wood
CASCON
1996
134views Education» more  CASCON 1996»
13 years 10 months ago
Paradigm shift in software re-engineering: an experience report
Software re-engineering is one of the solutions advocated for the problems that are encountered during maintenance. The three major phases of a re-engineering process are (i) reve...
Kasilingam Periyasamy, C. Mathew
BMCBI
2010
172views more  BMCBI 2010»
13 years 8 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
BMCBI
2007
139views more  BMCBI 2007»
13 years 8 months ago
XSTREAM: A practical algorithm for identification and architecture modeling of tandem repeats in protein sequences
Background: Biological sequence repeats arranged in tandem patterns are widespread in DNA and proteins. While many software tools have been designed to detect DNA tandem repeats (...
Aaron M. Newman, James B. Cooper
CORR
2010
Springer
144views Education» more  CORR 2010»
13 years 8 months ago
Algorithmic Verification of Single-Pass List Processing Programs
We introduce streaming data string transducers that map input data strings to output data strings in a single left-to-right pass in linear time. Data strings are (unbounded) seque...
Rajeev Alur, Pavol Cerný