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BMCBI
2007
79views more  BMCBI 2007»
13 years 7 months ago
Orthology prediction at scalable resolution by phylogenetic tree analysis
Background: Orthology is one of the cornerstones of gene function prediction. Dividing the phylogenetic relations between genes into either orthologs or paralogs is however an ove...
René T. J. M. van der Heijden, Berend Snel,...
BMCBI
2006
182views more  BMCBI 2006»
13 years 7 months ago
AceTree: a tool for visual analysis of Caenorhabditis elegans embryogenesis
Background: The invariant lineage of the nematode Caenorhabditis elegans has potential as a powerful tool for the description of mutant phenotypes and gene expression patterns. We...
Thomas J. Boyle, Zhirong Bao, John I. Murray, Carl...
BMCBI
2004
154views more  BMCBI 2004»
13 years 7 months ago
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
Background: With ever increasing numbers of closely related virus genomes being sequenced, it has become desirable to be able to compare two genomes at a level more detailed than ...
Ryan Brodie, Alex J. Smith, Rachel L. Roper, Vasil...
IWMM
2007
Springer
85views Hardware» more  IWMM 2007»
14 years 1 months ago
Uniqueness inference for compile-time object deallocation
This paper presents an analysis and transformation for individual object reclamation in Java programs. First, we propose a uniqueness inference algorithm that identifies variable...
Sigmund Cherem, Radu Rugina
SSDBM
2006
IEEE
167views Database» more  SSDBM 2006»
14 years 1 months ago
Exploring Data Streams with Nonparametric Estimators
A variety of real-world applications requires a meaningful online analysis of transient data streams. An important building block of many analysis tasks is the characterization of...
Christoph Heinz, Bernhard Seeger