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BMCBI
2006
133views more  BMCBI 2006»
13 years 8 months ago
Choosing negative examples for the prediction of protein-protein interactions
The protein-protein interaction networks of even well-studied model organisms are sketchy at best, highlighting the continued need for computational methods to help direct experim...
Asa Ben-Hur, William Stafford Noble
BMCBI
2006
161views more  BMCBI 2006»
13 years 8 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen
BMCBI
2006
179views more  BMCBI 2006»
13 years 8 months ago
Accurate and unambiguous tag-to-gene mapping in serial analysis of gene expression
Background: In this study, we present a robust and reliable computational method for tag-togene assignment in serial analysis of gene expression (SAGE). The method relies on curre...
Rodrigo Malig, Cristian Varela, Eduardo Agosin, Fr...
BMCBI
2006
131views more  BMCBI 2006»
13 years 8 months ago
Hybridization interactions between probesets in short oligo microarrays lead to spurious correlations
Background: Microarrays measure the binding of nucleotide sequences to a set of sequence specific probes. This information is combined with annotation specifying the relationship ...
Michal J. Okoniewski, Crispin J. Miller
COMCOM
2006
112views more  COMCOM 2006»
13 years 8 months ago
Dynamic server selection using fuzzy inference in content distribution networks
To accommodate the exponential growth of Web traffic, Content Distribution Networks (CDN) have been designed and deployed to distribute content to different cache servers, and to ...
Lin Cai, Jun Ye, Jianping Pan, Xuemin Shen, Jon W....