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» Evaluating Between-Pathway Models with Expression Data
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BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila
Background: The discovery of cis-regulatory modules in metazoan genomes is crucial for understanding the connection between genes and organism diversity. It is important to quanti...
Saurabh Sinha, Mark D. Schroeder, Ulrich Unnerstal...
SIGMOD
2006
ACM
238views Database» more  SIGMOD 2006»
14 years 7 months ago
Continuous monitoring of top-k queries over sliding windows
Given a dataset P and a preference function f, a top-k query retrieves the k tuples in P with the highest scores according to f. Even though the problem is well-studied in convent...
Kyriakos Mouratidis, Spiridon Bakiras, Dimitris Pa...
EDBT
2009
ACM
136views Database» more  EDBT 2009»
14 years 2 months ago
Rule-based multi-query optimization
Data stream management systems usually have to process many long-running queries that are active at the same time. Multiple queries can be evaluated more efficiently together tha...
Mingsheng Hong, Mirek Riedewald, Christoph Koch, J...
OOPSLA
2005
Springer
14 years 27 days ago
Safe futures for Java
is a simple and elegant abstraction that allows concurrency to be expressed often through a relatively small rewrite of a sequential program. In the absence of side-effects, futur...
Adam Welc, Suresh Jagannathan, Antony L. Hosking
BMCBI
2007
165views more  BMCBI 2007»
13 years 7 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...