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» Evaluating Parallel Computing Systems in Bioinformatics
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HPDC
2010
IEEE
13 years 8 months ago
Optimization of a parallel permutation testing function for the SPRINT R package
The statistical language R and Bioconductor package are favoured by many biostatisticians for processing microarray data. The amount of data produced by these analyses has reached...
Savvas Petrou, Terence M. Sloan, Muriel Mewissen, ...
SC
1995
ACM
13 years 11 months ago
A Performance Evaluation of the Convex SPP-1000 Scalable Shared Memory Parallel Computer
The Convex SPP-1000 is the first commercial implementation of a new generation of scalable shared memory parallel computers with full cache coherence. It employs a hierarchical s...
Thomas L. Sterling, Daniel Savarese, Peter MacNeic...
CLOUDCOM
2010
Springer
13 years 5 months ago
Voronoi-Based Geospatial Query Processing with MapReduce
Geospatial queries (GQ) have been used in a wide variety of applications such as decision support systems, profile-based marketing, bioinformatics and GIS. Most of the existing qu...
Afsin Akdogan, Ugur Demiryurek, Farnoush Banaei Ka...
PARLE
1993
13 years 11 months ago
Arithmetic for Parallel Linear Recursive Query Evaluation in Deductive Databases
: An arithmetic approach, such as the Level-Finding method described in this paper for evaluating linear recursive queries in deductive database systems provides great potential fo...
Jerome Robinson, Shutian Lin
FCCM
2008
IEEE
128views VLSI» more  FCCM 2008»
14 years 2 months ago
Investigation of Programming Models for Emerging FPGA-Based High Performance Computing Systems
This work proposes a set of requirements for programming emerging FPGA-based high performance computing systems, and uses them to evaluate a number of existing parallel programmin...
Andrew W. H. House, Paul Chow