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BMCBI
2008
134views more  BMCBI 2008»
13 years 10 months ago
Clustering cancer gene expression data: a comparative study
Background The use of clustering methods for the discovery of cancer subtypes has drawn a great deal of attention in the scientific community. While bioinformaticians have propose...
Marcílio Carlos Pereira de Souto, Ivan G. C...
BMCBI
2007
93views more  BMCBI 2007»
13 years 10 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...
OTM
2009
Springer
14 years 4 months ago
TMBean: Optimistic Concurrency in Application Servers Using Transactional Memory
Abstract. In this experience report, we present an evaluation of different techniques to manage concurrency in the context of application servers. Traditionally, using entity beans...
Lucas Charles, Pascal Felber, Christophe Gêt...
ICPP
2006
IEEE
14 years 4 months ago
Data Transfers between Processes in an SMP System: Performance Study and Application to MPI
— This paper focuses on the transfer of large data in SMP systems. Achieving good performance for intranode communication is critical for developing an efficient communication s...
Darius Buntinas, Guillaume Mercier, William Gropp
BMCBI
2010
118views more  BMCBI 2010»
13 years 10 months ago
Towards realistic benchmarks for multiple alignments of non-coding sequences
Background: With the continued development of new computational tools for multiple sequence alignment, it is necessary today to develop benchmarks that aid the selection of the mo...
Jaebum Kim, Saurabh Sinha