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BMCBI
2002
108views more  BMCBI 2002»
13 years 7 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
FLAIRS
2009
13 years 5 months ago
Analyzing Team Actions with Cascading HMM
While team action recognition has a relatively extended literature, less attention has been given to the detailed realtime analysis of the internal structure of the team actions. ...
Brandyn Allen White, Nate Blaylock, Ladislau B&oum...
BMCBI
2010
123views more  BMCBI 2010»
13 years 2 months ago
Predicting conserved protein motifs with Sub-HMMs
Background: Profile HMMs (hidden Markov models) provide effective methods for modeling the conserved regions of protein families. A limitation of the resulting domain models is th...
Kevin Horan, Christian R. Shelton, Thomas Girke
ICML
2007
IEEE
14 years 8 months ago
A recursive method for discriminative mixture learning
We consider the problem of learning density mixture models for classification. Traditional learning of mixtures for density estimation focuses on models that correctly represent t...
Minyoung Kim, Vladimir Pavlovic
ICIAP
2009
ACM
14 years 8 months ago
A New Generative Feature Set Based on Entropy Distance for Discriminative Classification
Abstract. Score functions induced by generative models extract fixeddimensions feature vectors from different-length data observations by subsuming the process of data generation, ...
Alessandro Perina, Marco Cristani, Umberto Castell...