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» Evolutionary algorithms and dynamic programming
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BMCBI
2007
160views more  BMCBI 2007»
15 years 2 months ago
Convergent algorithms for protein structural alignment
Background: Many algorithms exist for protein structural alignment, based on internal protein coordinates or on explicit superposition of the structures. These methods are usually...
Leandro Martínez, Roberto Andreani, Jos&eac...
137
Voted
CCS
2009
ACM
15 years 9 months ago
Privacy-preserving genomic computation through program specialization
In this paper, we present a new approach to performing important classes of genomic computations (e.g., search for homologous genes) that makes a significant step towards privacy...
Rui Wang, XiaoFeng Wang, Zhou Li, Haixu Tang, Mich...
SIGCOMM
2010
ACM
15 years 2 months ago
DDE: dynamic data structure excavation
Dynamic Datastructure Excavation (DDE) is a new approach to extract datastructures from C binaries without any need for debugging symbols. Unlike most existing tools, DDE uses dyn...
Asia Slowinska, Traian Stancescu, Herbert Bos
ISMIR
2004
Springer
133views Music» more  ISMIR 2004»
15 years 8 months ago
Understanding Search Performance in Query-by-Humming Systems
Previous work in Query-by-Humming systems has left open many questions. Although a variety of techniques have been explored, there has been relatively little work to compare them ...
Roger B. Dannenberg, Ning Hu
160
Voted
EUROGP
2006
Springer
140views Optimization» more  EUROGP 2006»
15 years 6 months ago
Evolving Noisy Oscillatory Dynamics in Genetic Regulatory Networks
We introduce a genetic programming (GP) approach for evolving genetic networks that demonstrate desired dynamics when simulated as a discrete stochastic process. Our representation...
André Leier, P. Dwight Kuo, Wolfgang Banzha...