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BMCBI
2007
233views more  BMCBI 2007»
13 years 11 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
GECCO
2009
Springer
142views Optimization» more  GECCO 2009»
14 years 5 months ago
A stopping criterion based on Kalman estimation techniques with several progress indicators
The need for a stopping criterion in MOEA’s is a repeatedly mentioned matter in the domain of MOOP’s, even though it is usually left aside as secondary, while stopping criteri...
José Luis Guerrero, Jesús Garc&iacut...
COLCOM
2008
IEEE
14 years 5 months ago
Replication in Overlay Networks: A Multi-objective Optimization Approach
Recently, overlay network-based collaborative applications such as instant messaging, content sharing, and Internet telephony are becoming increasingly popular. Many of these appli...
Osama Al-Haj Hassan, Lakshmish Ramaswamy, John A. ...
EVOW
2007
Springer
14 years 5 months ago
Modeling the Shoot Apical Meristem in A. thaliana : Parameter Estimation for Spatial Pattern Formation
Understanding the self-regulatory mechanisms controlling the spatial and temporal structure of multicellular organisms represents one of the major challenges in molecular biology. ...
Tim Hohm, Eckart Zitzler
GECCO
2007
Springer
308views Optimization» more  GECCO 2007»
14 years 5 months ago
Multiobjective clustering with automatic k-determination for large-scale data
Web mining - data mining for web data - is a key factor of web technologies. Especially, web behavior mining has attracted a great deal of attention recently. Behavior mining invo...
Nobukazu Matake, Tomoyuki Hiroyasu, Mitsunori Miki...