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ICALP
2001
Springer
14 years 18 days ago
Permutation Editing and Matching via Embeddings
Abstract. If the genetic maps of two species are modelled as permutations of (homologous) genes, the number of chromosomal rearrangements in the form of deletions, block moves, inv...
Graham Cormode, S. Muthukrishnan, Süleyman Ce...
BMCBI
2006
130views more  BMCBI 2006»
13 years 8 months ago
Docking protein domains in contact space
Background: Many biological processes involve the physical interaction between protein domains. Understanding these functional associations requires knowledge of the molecular str...
Stefano Lise, Alice Walker-Taylor, David T. Jones
FPL
2010
Springer
188views Hardware» more  FPL 2010»
13 years 6 months ago
SeqHive: A Reconfigurable Computer Cluster for Genome Re-sequencing
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
Kristian Stevens, Henry Chen, Terry Filiba, Peter ...
ITIIS
2010
138views more  ITIIS 2010»
13 years 2 months ago
Identification of Fuzzy Inference System Based on Information Granulation
In this study, we propose a space search algorithm (SSA) and then introduce a hybrid optimization of fuzzy inference systems based on SSA and information granulation (IG). In comp...
Wei Huang, Lixin Ding, Sung-Kwun Oh, Chang-Won Jeo...
CODES
2011
IEEE
12 years 8 months ago
Analysis and optimization of fault-tolerant task scheduling on multiprocessor embedded systems
Reliability is a major requirement for most safety-related systems. To meet this requirement, fault-tolerant techniques such as hardware replication and software re-execution are ...
Jia Huang, Jan Olaf Blech, Andreas Raabe, Christia...