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    BMCBI
    2007
    108views more  BMCBI 2007»
    Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants
    13 years 8 months ago
    Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants
    Download  eprints.qut.edu.au
    Background: Single nucleotide polymorphisms (SNPs) and genes that exhibit presence/absence variation have provided informative marker sets for bacterial and viral genotyping. Iden...
    Erin P. Price, John Inman-Bamber, Venugopal Thiruv...
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    BMCBI
    2008
    142views more  BMCBI 2008»
    Strategies for measuring evolutionary conservation of RNA secondary structures
    13 years 8 months ago
    Strategies for measuring evolutionary conservation of RNA secondary structures
    Download  www.biomedcentral.com
    Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
    Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...
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    BMCBI
    2008
    91views more  BMCBI 2008»
    Presenting and exploring biological pathways with PathVisio
    13 years 8 months ago
    Presenting and exploring biological pathways with PathVisio
    Download  www.biomedcentral.com
    nd: Biological pathways are a useful abstraction of biological concepts, and software tools to deal with pathway diagrams can help biological research. PathVisio is a new visualiz...
    Martijn P. van Iersel, Thomas Kelder, Alexander R....
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    BMCBI
    2008
    108views more  BMCBI 2008»
    SPRINT: A new parallel framework for R
    13 years 8 months ago
    SPRINT: A new parallel framework for R
    Download  www.biomedcentral.com
    Background: Microarray analysis allows the simultaneous measurement of thousands to millions of genes or sequences across tens to thousands of different samples. The analysis of t...
    Jon Hill, Matthew Hambley, Thorsten Forster, Murie...
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    ALMOB
    2006
    155views more  ALMOB 2006»
    A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
    13 years 8 months ago
    A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
    Download  www.almob.org
    Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
    Jonathan E. Allen, Steven L. Salzberg
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