Background: This paper describes techniques for accelerating the performance of the string set matching problem with particular emphasis on applications in computational proteomic...
Yoginder S. Dandass, Shane C. Burgess, Mark Lawren...
Parallel simulation is a technique to accelerate microarchitecture simulation of CMPs by exploiting the inherent parallelism of CMPs. In this paper, we explore the simulation para...
Background: Likelihood (ML)-based phylogenetic inference has become a popular method for estimating the evolutionary relationships among species based on genomic sequence data. Th...
Software packet processing is becoming more important to enable differentiated and rapidly-evolving network services. With increasing numbers of programmable processor and acceler...
Custom Computing Machines (CCM's) have demonstrated significant performance advantages over general-purpose processors for certain classes of problems. However, problems can ...