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BMCBI
2004
133views more  BMCBI 2004»
13 years 7 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
JCC
2010
103views more  JCC 2010»
13 years 6 months ago
Conformational behavior of simple furanosides studied by optical rotation
: Experimental and theoretical specific optical rotations (OR) of anhydro, epithio, and epiminoderivatives of methyl tetrofuranosides in chloroform solutions have been compared an...
Jakub Kaminský, Ivan Raich, Katerina Tomc&a...
BMCBI
2010
123views more  BMCBI 2010»
13 years 7 months ago
A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction
Background: Predicting which molecules can bind to a given binding site of a protein with known 3D structure is important to decipher the protein function, and useful in drug desi...
Brice Hoffmann, Mikhail Zaslavskiy, Jean-Philippe ...
BMCBI
2006
86views more  BMCBI 2006»
13 years 7 months ago
The impact of sample imbalance on identifying differentially expressed genes
Background: Recently several statistical methods have been proposed to identify genes with differential expression between two conditions. However, very few studies consider the p...
Kun Yang, Jianzhong Li, Hong Gao
WWW
2010
ACM
14 years 2 months ago
Entity relation discovery from web tables and links
The World-Wide Web consists not only of a huge number of unstructured texts, but also a vast amount of valuable structured data. Web tables [2] are a typical type of structured in...
Cindy Xide Lin, Bo Zhao, Tim Weninger, Jiawei Han,...