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» Exploring Heterogeneous Biological Databases: Tools and Appl...
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BMCBI
2002
120views more  BMCBI 2002»
13 years 8 months ago
tacg - a grep for DNA
Background: Pattern matching is the core of bioinformatics; it is used in database searching, restriction enzyme mapping, and finding open reading frames. It is done repeatedly ov...
Harry Mangalam
APBC
2003
123views Bioinformatics» more  APBC 2003»
13 years 10 months ago
A Platform for the Description, Distribution and Analysis of Genetic Polymorphism Data
In this paper we suggest the requirements for an open platform designed for the description, distribution and analysis of genetic polymorphism data. This platform is discussed in ...
Greg D. Tyrelle, Garry C. King
SIGSOFT
2010
ACM
13 years 6 months ago
Software is data too
Software systems are designed and engineered to process data. However, software is data too. The size and variety of today's software artifacts and the multitude of stakehold...
Andrian Marcus, Tim Menzies
BMCBI
2008
208views more  BMCBI 2008»
13 years 8 months ago
GraphFind: enhancing graph searching by low support data mining techniques
Background: Biomedical and chemical databases are large and rapidly growing in size. Graphs naturally model such kinds of data. To fully exploit the wealth of information in these...
Alfredo Ferro, Rosalba Giugno, Misael Mongiov&igra...
SSDBM
2010
IEEE
220views Database» more  SSDBM 2010»
14 years 1 months ago
Prefix Tree Indexing for Similarity Search and Similarity Joins on Genomic Data
Similarity search and similarity join on strings are important for applications such as duplicate detection, error detection, data cleansing, or comparison of biological sequences....
Astrid Rheinländer, Martin Knobloch, Nicky Ho...