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» Exploring Heterogeneous Biological Databases: Tools and Appl...
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BMCBI
2005
156views more  BMCBI 2005»
13 years 8 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
IRES
2002
63views more  IRES 2002»
13 years 8 months ago
The Semantic Web, universalist ambition and some lessons from librarianship
Building the semantic web encounters problems similar to building large bibliographic systems. The experience of librarianship in controlling large, heterogeneous collections of b...
Terrence A. Brooks
BMCBI
2010
175views more  BMCBI 2010»
13 years 8 months ago
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services
Background: Many complementary solutions are available for the identifier mapping problem. This creates an opportunity for bioinformatics tool developers. Tools can be made to fle...
Martijn P. van Iersel, Alexander R. Pico, Thomas K...
ISQED
2003
IEEE
85views Hardware» more  ISQED 2003»
14 years 2 months ago
Interoperability Beyond Design: Sharing Knowledge between Design and Manufacturing
The nature of IC design has is necessarily evolving to a more data-centric design flow in which EDA tools share a common information in a design database without the negative cost...
D. R. Cottrell, T. J. Grebinski
CORR
2007
Springer
100views Education» more  CORR 2007»
13 years 8 months ago
Identifying statistical dependence in genomic sequences via mutual information estimates
Questions of understanding and quantifying the representation and amount of information in organisms have become a central part of biological research, as they potentially hold th...
H. M. Aktulga, I. Kontoyiannis, L. A. Lyznik, Luka...