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BMCBI
2010
122views more  BMCBI 2010»
13 years 7 months ago
Fast and accurate protein substructure searching with simulated annealing and GPUs
Background: Searching a database of protein structures for matches to a query structure, or occurrences of a structural motif, is an important task in structural biology and bioin...
Alex Stivala, Peter J. Stuckey, Anthony Wirth
BMCBI
2007
166views more  BMCBI 2007»
13 years 7 months ago
Optimization of filtering criterion for SEQUEST database searching to improve proteome coverage in shotgun proteomics
Background: In proteomic analysis, MS/MS spectra acquired by mass spectrometer are assigned to peptides by database searching algorithms such as SEQUEST. The assignations of pepti...
Xinning Jiang, Xiaogang Jiang, Guanghui Han, Mingl...
ICDM
2009
IEEE
141views Data Mining» more  ICDM 2009»
14 years 2 months ago
Scalable Algorithms for Distribution Search
Distribution data naturally arise in countless domains, such as meteorology, biology, geology, industry and economics. However, relatively little attention has been paid to data m...
Yasuko Matsubara, Yasushi Sakurai, Masatoshi Yoshi...
ATAL
2005
Springer
14 years 1 months ago
Task inference and distributed task management in the Centibots robotic system
We describe a very large scale distributed robotic system, involving a team of over 100 robots, that has been successfully deployed in large, unknown indoor environments, over ext...
Charlie Ortiz, Régis Vincent, Benoit Moriss...
IWINAC
2007
Springer
14 years 1 months ago
EDNA: Estimation of Dependency Networks Algorithm
One of the key points in Estimation of Distribution Algorithms (EDAs) is the learning of the probabilistic graphical model used to guide the search: the richer the model the more ...
José A. Gámez, Juan L. Mateo, Jose M...