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ISBRA
2010
Springer
14 years 5 months ago
Modeling without Borders: Creating and Annotating VCell Models Using the Web
Biological research is becoming increasingly complex and data-rich, with multiple public databases providing a variety of resources: hundreds of thousands of substances and interac...
Michael L. Blinov, Oliver Ruebenacker, James C. Sc...
BMCBI
2005
97views more  BMCBI 2005»
13 years 10 months ago
Modelling the correlation between the activities of adjacent genes in drosophila
Background: Correlation between the expression levels of genes which are located close to each other on the genome has been found in various organisms, including yeast, drosophila...
Helene H. Thygesen, Aeilko H. Zwinderman
BICOB
2009
Springer
13 years 8 months ago
A Biclustering Method to Discover Co-regulated Genes Using Diverse Gene Expression Datasets
We propose a two-step biclustering approach to mine co-regulation patterns of a given reference gene to discover other genes that function in a common biological process. Currently...
Doruk Bozdag, Jeffrey D. Parvin, Ümit V. &Cce...
BMCBI
2010
158views more  BMCBI 2010»
13 years 11 months ago
Validation of differential gene expression algorithms: Application comparing fold-change estimation to hypothesis testing
Background: Sustained research on the problem of determining which genes are differentially expressed on the basis of microarray data has yielded a plethora of statistical algorit...
Corey M. Yanofsky, David R. Bickel
BMCBI
2007
147views more  BMCBI 2007»
13 years 11 months ago
Statistical analysis and significance testing of serial analysis of gene expression data using a Poisson mixture model
Background: Serial analysis of gene expression (SAGE) is used to obtain quantitative snapshots of the transcriptome. These profiles are count-based and are assumed to follow a Bin...
Scott D. Zuyderduyn