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BMCBI
2007
166views more  BMCBI 2007»
13 years 7 months ago
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Background: The search for enriched features has become widely used to characterize a set of genes or proteins. A key aspect of this technique is its ability to identify correlati...
Roland Barriot, David J. Sherman, Isabelle Dutour
IEEEVAST
2010
13 years 2 months ago
Improving the visual analysis of high-dimensional datasets using quality measures
Modern visualization methods are needed to cope with very highdimensional data. Efficient visual analytical techniques are required to extract the information content in these dat...
Georgia Albuquerque, Martin Eisemann, Dirk J. Lehm...
WWW
2010
ACM
14 years 2 months ago
Not so creepy crawler: easy crawler generation with standard xml queries
Web crawlers are increasingly used for focused tasks such as the extraction of data from Wikipedia or the analysis of social networks like last.fm. In these cases, pages are far m...
Franziska von dem Bussche, Klara A. Weiand, Benedi...
NAR
2008
107views more  NAR 2008»
13 years 7 months ago
MutDB: update on development of tools for the biochemical analysis of genetic variation
Understanding how genetic variation affects the molecular function of gene products is an emergent area of bioinformatic research. Here, we present updates to MutDB (http://www.mu...
Arti Singh, Adebayo Olowoyeye, Peter H. Baenziger,...
BMCBI
2010
108views more  BMCBI 2010»
13 years 7 months ago
Error, reproducibility and sensitivity : a pipeline for data processing of Agilent oligonucleotide expression arrays
Background: Expression microarrays are increasingly used to obtain large scale transcriptomic information on a wide range of biological samples. Nevertheless, there is still much ...
Benjamin Chain, Helen Bowen, John Hammond, Wilfrie...