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» Extraction of Structured Programs from Specification Proofs
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BMCBI
2007
99views more  BMCBI 2007»
13 years 8 months ago
Flexible mapping of homology onto structure with Homolmapper
Background: Over the past decade, a number of tools have emerged for the examination of homology relationships among protein sequences in a structural context. Most recent softwar...
Nathan C. Rockwell, J. Clark Lagarias
SCP
2011
255views Communications» more  SCP 2011»
13 years 3 months ago
Map fusion for nested datatypes in intensional type theory
A definitional extension LNGMIt of the Calculus of Inductive Constructions (CIC), that underlies the proof assistant Coq, is presented that allows also to program with nested dat...
Ralph Matthes
BMCBI
2006
108views more  BMCBI 2006»
13 years 8 months ago
Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
Huiquan Wang, Craig J. Benham
DILS
2006
Springer
14 years 13 days ago
On Querying OBO Ontologies Using a DAG Pattern Query Language
The Open Biomedical Ontologies (OBO) is a consortium that serves as a repository of ontologies that are structured like directed acyclic graphs. In this paper we present a language...
Amarnath Gupta, Simone Santini
DEEC
2006
IEEE
14 years 2 months ago
Maintaining Web Navigation Flows for Wrappers
A substantial subset of the web data follows some kind of underlying structure. In order to let software programs gain full benefit from these “semistructured” web sources, wra...
Juan Raposo, Manuel Álvarez, José Lo...