112 search results - page 21 / 23 » FPGA-Based Multigrid Computation for Molecular Dynamics Simu... |
RECOMB
2007
Springer
14 years 7 months ago
2007
Springer
We present a technique for approximating the free energy of protein structures using Generalized Belief Propagation (GBP). The accuracy and utility of these estimates are then demo...
BMCBI
2005
13 years 7 months ago
2005
Background: Recent advances in molecular biology techniques provide an opportunity for developing detailed mathematical models of biological processes. An iterative scheme is intr...
MMAS
2010
Springer
13 years 1 months ago
2010
Springer
Based on the thermodynamic concept of a reservoir, we investigate a computational model for interaction with unresolved degrees of freedom (a thermal bath). We assume that a finite...
BICOB
2010
Springer
13 years 12 months ago
2010
Springer
Molecular dynamics simulations have been employed by biologists to study the protein folding problem. Such simulations have resulted in a large number of protein folding trajector...
ENTCS
2006
13 years 7 months ago
2006
In recent years, there has been increasing interest in computational models of biological systems based on various calculi of communicating processes, such as the stochastic pi-ca...