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BMCBI
2007
123views more  BMCBI 2007»
13 years 9 months ago
Tracembler - software for in-silico chromosome walking in unassembled genomes
Background: Whole genome shotgun sequencing produces increasingly higher coverage of a genome with random sequence reads. Progressive whole genome assembly and eventual finishing ...
Qunfeng Dong, Matthew D. Wilkerson, Volker Brendel
CL
2010
Springer
13 years 9 months ago
Isolating untrusted software extensions by custom scoping rules
In a modern programming language, scoping rules determine the visibility of names in various regions of a program [15]. In this work, we examine the idea of allowing an applicatio...
Philip W. L. Fong, Simon A. Orr
WOSS
2004
ACM
14 years 2 months ago
Exploiting architectural prescriptions for self-managing, self-adaptive systems: a position paper
We propose a high-level approach to software architecture that bridges the gap between system requirements (in the problem space) and the architectural design (in the solution spa...
Matthew J. Hawthorne, Dewayne E. Perry
IWPC
2000
IEEE
14 years 1 months ago
Types and Concept Analysis for Legacy Systems
We combine type inference and concept analysis in order to gain insight into legacy software systems. Type inference for COBOL yields the types for variables and program parameter...
Tobias Kuipers, Leon Moonen
WCRE
2000
IEEE
14 years 1 months ago
GXL: Toward a Standard Exchange Format
This paper describes ongoing work toward the development of a standard software exchange format (SEF), for exchanging information among tools that analyze computer programs. A par...
Richard C. Holt, Andreas Winter, Andy Schürr