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BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
Quantitative analysis of EGR proteins binding to DNA: assessing additivity in both the binding site and the protein
Background: Recognition codes for protein-DNA interactions typically assume that the interacting positions contribute additively to the binding energy. While this is known to not ...
Jiajian Liu, Gary D. Stormo
BMCBI
2007
247views more  BMCBI 2007»
13 years 8 months ago
A survey of DNA motif finding algorithms
Background: Unraveling the mechanisms that regulate gene expression is a major challenge in biology. An important task in this challenge is to identify regulatory elements, especi...
Modan K. Das, Ho-Kwok Dai
CORR
2010
Springer
139views Education» more  CORR 2010»
13 years 2 months ago
On Communication over Unknown Sparse Frequency-Selective Block-Fading Channels
The problem of reliable communication over unknown frequency-selective block-fading channels with sparse impulse responses is considered. In particular, discrete-time impulse respo...
Arun Pachai Kannu, Philip Schniter
GIS
2007
ACM
14 years 2 months ago
Cell-based generalization of 3D building groups with outlier management
In this paper, we present a technique that generalizes 3D building groups of virtual 3D city models according to a cell structure that is derived from infrastructure networks. In ...
Tassilo Glander, Jürgen Döllner
SODA
2010
ACM
209views Algorithms» more  SODA 2010»
14 years 5 months ago
Counting Stars and Other Small Subgraphs in Sublinear Time
Detecting and counting the number of copies of certain subgraphs (also known as network motifs or graphlets), is motivated by applications in a variety of areas ranging from Biolo...
Mira Gonen, Dana Ron, Yuval Shavitt